Events

Nov. 2020
Lecture Series
Virtual
Feb. 2021
Mid-Term Meeting
Virtual

Feb. 2021
May 2021
Biostatistics Workshop
Virtual
Nov. 2021
Imaging Workshop
Stockholm, Sweden

Nov. 2021
July 2022
NGS and Data Analysis Workshop
Budapest, Hungary
May 2023
Bioinformatics Workshop
Istanbul, Turkey

May 2023
Sept. 2023
Summer School
Sesimbra, Portugal
April 2024
Final Symposium
Gießen, Germany

April 2024

Welcome Retreat

Imaging 1:

Immunofluorescence microscopy

NGS 1:

Preparation of RNA-seq library

Data analysis 1:

Including the right controls

Transferable skills 1:

Project & Self-Management
Research Integrity & Responsible Research
Open Science: EC policy & FAIR principles
Gender Equality & Gender Dimension

Lecture Series

Starting from November 2020 and till October 2021, Cell2Cell organized a weekly lecture series. Every week a different topic was presented by one of our supervisors (main supervisors and partners) and by external Principal Investigators (PIs) as well. The lectures focused on topics relevant to Cell2Cell such as chromatin biology, bioinformatics, parasitology, and career path.

Lecture series – Part 1 (02.11.2020 – 15.02.2021)

Lecture	Presenter	Title
1	Naama Barkai, Weizmann Institute of Science, Rehovot	Chromatin-based heterogeneity in stress response
2	Jane Mellor, Oxford University, Oxford	Assessing Cell to Cell Variation using smRNA FISH: From smRNA FISH to a mathematical model for gene expression: how antisense transcription modulates chromatin structure to increase noise
3	Richard Bartfai, Radboud University, Nijmegen	Epigenetic memoirs of a parasite
4	Luisa Figueiredo, iMM, Lisbon	Tissue tropism in the mammalian host
5	Maria Colome Tatche, Helmholtz Center Munich, Munich	Single-cell computational epigenomics to quantify population heterogeneity
6	Sigurd Braun, LMU Munich, Munich	Put the periphery into the focus: spatial control of silent chromatin
7	Till Voss, Swiss TPH, Basel	Epigenetic regulation of sexual commitment in the malaria parasite Plasmodium falciparum
8	Magda Bienko, Karolinska Institutet, Stockholm	Illuminating Genome Organization through Integrated Microscopy and Sequencing
9	Angela Taddei, Institut Curie, Paris	How to whip the genome into shape? Compartmentalization and dynamics of heterochromatin and repair factors in the yeast nucleus
10	Ugur Sezerman, Epigenetiks, Istanbul	Applications of AI in Personalized Medicine
11	Robert Schneider, Helmholtz Center Munich, Munich	Regulation of gene induction and repression in individual cells
12	Nicolai Siegel, LMU, Munich	The benefit of being different: understanding cell-to-cell heterogeneity in pathogens
13	Balint Szabo, Cellsorter, Budapest	Robotic single-cell isolation on a microscope

Lecture series – Part 2 (01.03.2021 – 03.05.2021)

Lecture	Presenter	Title
14	Keisuke Goda, University of Tokyo, Tokyo	Intelligent Image-Activated Cell Sorting
15	Clarissa Nobile, University of California, Merced	Candida albicans biofilms: tales of basic science to translation
16	Nao Nitta, K.K. CYBO, Tokyo	Moving from the Lab to the Market: CYBO’s Challenge to Innovate Cell Analysis
17	Bassem Al-Sady, University of California, San Francisco (UCSF)	Examining the dynamics of epigenetic domains in single cells
18	CJ Fitzsimons, Leadership Sculptor, Heidelberg	Leadership Launch: Career Path
19	Alexander Brehm, University of Marburg, Marburg	ATP-dependent chromatin remodelers and RNA
20	Sandra Hake, Justus-Liebig-University, Giessen	Career in science: a very personal view

Lecture series – Parasitology (21.06.2021 – 19.07.2021)

Lecture	Presenter	Title
1	Danae Schulz, Harvey Mudd College, Claremont	Immune Evasion inTrypanosomatids
2	Danae Schulz, Harvey Mudd College, Claremont	Immune Evasion inTrypanosomatids
3	Shruthi Vembar, Institute of Bioinformatics and Applied Biotechnology, Bengaluru	Gene regulatory mechanisms governing Plasmodium development and stage transitions
4		Regulation of Toxoplasma developmental switches through transcriptional rewiring

Lecture series – Chromatin Biology (27.09.2021 – 17.10.2021)

Lecture	Presenter	Title
1	Ritwick Sawarkar, University of Cambridge	Cellular response to stress: a chromatin perspective
2	Ritwick Sawarkar, University of Cambridge	Cellular response to stress: a chromatin perspective
3	Claudia Keller Valsecchi, Institute of Molecular Biology Mainz (IMB), Mainz	Evolutionary and pathological aspects of gene dosage alterations
4		Cis-acting non-coding RNAs and X chromosome dosage compensation

ESR Workshop 1

ESR Workshop 2

Summer School

ESR Workshop 3

Final Conference / Career Day

This project has received funding from the European Union’s Horizon 2020 Research and Innovation programme under the Marie Skłodowska-Curie grant number 860675.